Package: missForestPredict 1.0.1

missForestPredict: Missing Value Imputation using Random Forest for Prediction Settings

Missing data imputation based on the 'missForest' algorithm (Stekhoven, Daniel J (2012) <doi:10.1093/bioinformatics/btr597>) with adaptations for prediction settings. The function missForest() is used to impute a (training) dataset with missing values and to learn imputation models that can be later used for imputing new observations. The function missForestPredict() is used to impute one or multiple new observations (test set) using the models learned on the training data. For more details see Albu, E., Gao, S., Wynants, L., & Van Calster, B. (2024). missForestPredict--Missing data imputation for prediction settings <doi:10.48550/arXiv.2407.03379>.

Authors:Elena Albu [aut, cre]

missForestPredict_1.0.1.tar.gz
missForestPredict_1.0.1.zip(r-4.7-any)missForestPredict_1.0.1.zip(r-4.6-any)missForestPredict_1.0.1.zip(r-4.5-any)
missForestPredict_1.0.1.tgz(r-4.6-any)missForestPredict_1.0.1.tgz(r-4.5-any)
missForestPredict_1.0.1.tar.gz(r-4.7-any)missForestPredict_1.0.1.tar.gz(r-4.6-any)
missForestPredict_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
missForestPredict/json (API)

# Install 'missForestPredict' in R:
install.packages('missForestPredict', repos = c('https://sibipx.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/sibipx/missforestpredict/issues

On CRAN:

Conda:

4.86 score 1 stars 1 packages 24 scripts 503 downloads 8 exports 5 dependencies

Last updated from:22c6aa59a1. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK150
source / vignettesOK375
linux-releaseOK176
macos-releaseOK151
macos-oldrelOK169
windows-develOK88
windows-releaseOK103
windows-oldrelOK90
wasm-releaseOK121

Exports:calculate_convergencecheck_predictor_matrixcreate_predictor_matrixevaluate_imputation_errormissForestmissForestPredictproduce_NAprop_usable_cases

Dependencies:latticeMatrixrangerRcppRcppEigen

Using the missForestPredict package
Introduction | What is this document? | Package information | Package functionality | How to install | How to use the package | Data used for demonstration | Imputation of training and test set | Imputation of a single new observation | Predict without storing the imputed matrix | Impute larger datasets by adapting num.trees | Custom initialization | Using predictor_matrix | Variables not imputed and not used as predictor | Variables not imputed but used as predictor | Variables imputed but not used as predictor | Impact of proportion_usable_cases on the predictor matrix | Final words | References

Last update: 2025-05-26
Started: 2022-01-25

missForestPredict convergence criteria and error monitoring
Introduction | What is this document? | Convergence criteria | Imputation error monitoring | Examples | Data used for demonstration | Inspect convergence errors | Use weighted average in convergence | Assess imputation error when the true values are known | References

Last update: 2023-12-08
Started: 2022-02-09